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CN09_07580 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_07580" - GntR family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
CN09_07580GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (248 aa)    
Predicted Functional Partners:
CN09_07590
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (342 aa)
              0.860
CN09_07585
ABC transporter permease; Membrane component of a putative sugar ABC transporter system; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (322 aa)
              0.860
CN09_07595
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (507 aa)
              0.836
CN09_07600
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (320 aa)
              0.642
CN09_21180
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (255 aa)
   
          0.635
CN09_22985
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
 
     
  0.626
CN09_29975
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)
   
          0.623
CN09_33025
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (239 aa)
 
     
  0.579
CN09_31750
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
 
     
  0.575
CN09_22915
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (243 aa)
   
          0.569
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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