node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplO | rplQ | CN09_08800 | CN09_08770 | 50S ribosomal protein L15; Binds to the 23S rRNA | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.999 |
rplO | rplY | CN09_08800 | CN09_04250 | 50S ribosomal protein L15; Binds to the 23S rRNA | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance | 0.999 |
rplO | rpmD | CN09_08800 | CN09_08805 | 50S ribosomal protein L15; Binds to the 23S rRNA | 50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.999 |
rplO | rpmE | CN09_08800 | CN09_02145 | 50S ribosomal protein L15; Binds to the 23S rRNA | 50S ribosomal protein L31; Binds the 23S rRNA | 0.999 |
rplO | rpmJ | CN09_08800 | CN09_02055 | 50S ribosomal protein L15; Binds to the 23S rRNA | 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family | 0.999 |
rplO | rpsB | CN09_08800 | CN09_07925 | 50S ribosomal protein L15; Binds to the 23S rRNA | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family | 0.999 |
rplO | rpsD | CN09_08800 | CN09_06590 | 50S ribosomal protein L15; Binds to the 23S rRNA | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit | 0.999 |
rplO | rpsK | CN09_08800 | CN09_08780 | 50S ribosomal protein L15; Binds to the 23S rRNA | Small subunit ribosomal protein s11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome | 0.999 |
rplO | rpsM | CN09_08800 | CN09_08785 | 50S ribosomal protein L15; Binds to the 23S rRNA | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites | 0.999 |
rplO | rpsQ | CN09_08800 | CN09_08850 | 50S ribosomal protein L15; Binds to the 23S rRNA | Small subunit ribosomal protein s17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA | 0.999 |
rplQ | rplO | CN09_08770 | CN09_08800 | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology | 50S ribosomal protein L15; Binds to the 23S rRNA | 0.999 |
rplQ | rplY | CN09_08770 | CN09_04250 | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance | 0.999 |
rplQ | rpmD | CN09_08770 | CN09_08805 | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology | 50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.999 |
rplQ | rpmE | CN09_08770 | CN09_02145 | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology | 50S ribosomal protein L31; Binds the 23S rRNA | 0.999 |
rplQ | rpmJ | CN09_08770 | CN09_02055 | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology | 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family | 0.999 |
rplQ | rpsB | CN09_08770 | CN09_07925 | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family | 0.999 |
rplQ | rpsD | CN09_08770 | CN09_06590 | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit | 0.999 |
rplQ | rpsK | CN09_08770 | CN09_08780 | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology | Small subunit ribosomal protein s11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome | 0.999 |
rplQ | rpsM | CN09_08770 | CN09_08785 | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites | 0.999 |
rplQ | rpsQ | CN09_08770 | CN09_08850 | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology | Small subunit ribosomal protein s17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA | 0.999 |