CN09_09650 protein (Agrobacterium rhizogenes)

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CN09_09650

N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method- Protein Homology (404 aa)

Predicted Functional Partners:

CN09_15290

0.999

nnrD

0.999

CN09_06240

0.987

CN09_08270

0.951

CN09_09645

0.887

CN09_15390

0.852

CN09_08255

0.829

prfB

0.806

mutL

0.803

rnr

0.791

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_06240	CN09_09650	CN09_06240	CN09_09650	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.987
CN09_06240	nnrD	CN09_06240	CN09_07485	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family	0.547
CN09_08255	CN09_08270	CN09_08255	CN09_08270	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_08255	CN09_09650	CN09_08255	CN09_09650	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.829
CN09_08255	CN09_15290	CN09_08255	CN09_15290	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_08255	CN09_15390	CN09_08255	CN09_15390	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	0.999
CN09_08255	mutL	CN09_08255	CN09_16340	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	0.814
CN09_08255	nnrD	CN09_08255	CN09_07485	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family	0.491
CN09_08255	rnr	CN09_08255	CN09_09830	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	Ribonuclease R; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs	0.845
CN09_08270	CN09_08255	CN09_08270	CN09_08255	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	0.999
CN09_08270	CN09_09645	CN09_08270	CN09_09645	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.926
CN09_08270	CN09_09650	CN09_08270	CN09_09650	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.951
CN09_08270	CN09_15290	CN09_08270	CN09_15290	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_08270	CN09_15390	CN09_08270	CN09_15390	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	0.999
CN09_08270	mutL	CN09_08270	CN09_16340	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	0.958
CN09_08270	nnrD	CN09_08270	CN09_07485	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family	0.999
CN09_08270	prfB	CN09_08270	CN09_09640	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA	0.535
CN09_08270	rnr	CN09_08270	CN09_09830	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribonuclease R; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs	0.478
CN09_09645	CN09_08270	CN09_09645	CN09_08270	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.926
CN09_09645	CN09_09650	CN09_09645	CN09_09650	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.887

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