CN09_10390 protein (Agrobacterium rhizogenes)

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Score

CN09_10390

Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)

Predicted Functional Partners:

CN09_10375

0.944

CN09_10400

0.926

glyA

0.883

CN09_10410

0.868

CN09_20865

0.684

CN09_10370

0.635

CN09_01935

0.632

CN09_10405

0.596

nrdR

0.596

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01935	CN09_10390	CN09_01935	CN09_10390	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.632
CN09_10370	CN09_10375	CN09_10370	CN09_10375	Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	0.999
CN09_10370	CN09_10390	CN09_10370	CN09_10390	Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology	Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.635
CN09_10370	CN09_10410	CN09_10370	CN09_10410	Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology	Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ALAD family	0.799
CN09_10370	glyA	CN09_10370	CN09_10385	Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology	Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	0.977
CN09_10370	nrdR	CN09_10370	CN09_10380	Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	0.939
CN09_10375	CN09_10370	CN09_10375	CN09_10370	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_10375	CN09_10390	CN09_10375	CN09_10390	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.944
CN09_10375	CN09_10410	CN09_10375	CN09_10410	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ALAD family	0.999
CN09_10375	glyA	CN09_10375	CN09_10385	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	0.999
CN09_10375	nrdR	CN09_10375	CN09_10380	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	0.999
CN09_10390	CN09_01935	CN09_10390	CN09_01935	Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.632
CN09_10390	CN09_10370	CN09_10390	CN09_10370	Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method- Protein Homology	0.635
CN09_10390	CN09_10375	CN09_10390	CN09_10375	Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	0.944
CN09_10390	CN09_10400	CN09_10390	CN09_10400	Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.926
CN09_10390	CN09_10405	CN09_10390	CN09_10405	Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.596
CN09_10390	CN09_10410	CN09_10390	CN09_10410	Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ALAD family	0.868
CN09_10390	CN09_20865	CN09_10390	CN09_20865	Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.684
CN09_10390	glyA	CN09_10390	CN09_10385	Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	0.883
CN09_10390	nrdR	CN09_10390	CN09_10380	Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	0.596

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