CN09_10435 protein (Agrobacterium rhizogenes)

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Score

CN09_10435

Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology (130 aa)

Predicted Functional Partners:

ribB

0.999

CN09_10430

0.984

nnrD

0.895

CN09_18560

0.833

ate

0.661

CN09_10425

0.661

flgK

0.652

CN09_18035

0.629

lysS

0.602

CN09_17575

0.565

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_10425	CN09_10430	CN09_10425	CN09_10430	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.649
CN09_10425	CN09_10435	CN09_10425	CN09_10435	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	0.661
CN09_10425	ate	CN09_10425	CN09_10420	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Putative arginyl-tRNA--protein transferase; May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate	0.851
CN09_10430	CN09_10425	CN09_10430	CN09_10425	AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.649
CN09_10430	CN09_10435	CN09_10430	CN09_10435	AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	0.984
CN09_10430	ate	CN09_10430	CN09_10420	AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Putative arginyl-tRNA--protein transferase; May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate	0.663
CN09_10435	CN09_10425	CN09_10435	CN09_10425	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.661
CN09_10435	CN09_10430	CN09_10435	CN09_10430	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.984
CN09_10435	CN09_17575	CN09_10435	CN09_17575	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the helicase family. UvrD subfamily	0.565
CN09_10435	CN09_18035	CN09_10435	CN09_18035	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.629
CN09_10435	CN09_18560	CN09_10435	CN09_18560	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.833
CN09_10435	ate	CN09_10435	CN09_10420	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	Putative arginyl-tRNA--protein transferase; May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate	0.661
CN09_10435	flgK	CN09_10435	CN09_15645	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	With FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; Derived by automated computational analysis using gene prediction method- Protein Homology	0.652
CN09_10435	lysS	CN09_10435	CN09_01370	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	Lysine--tRNA ligase; Class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family	0.602
CN09_10435	nnrD	CN09_10435	CN09_07485	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family	0.895
CN09_10435	ribB	CN09_10435	CN09_16765	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family	0.999
CN09_17575	CN09_10435	CN09_17575	CN09_10435	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the helicase family. UvrD subfamily	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	0.565
CN09_17575	CN09_18560	CN09_17575	CN09_18560	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the helicase family. UvrD subfamily	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.774
CN09_17575	ribB	CN09_17575	CN09_16765	ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the helicase family. UvrD subfamily	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family	0.802
CN09_18035	CN09_10435	CN09_18035	CN09_10435	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Cytochrome C biogenesis protein CcmH; Derived by automated computational analysis using gene prediction method- Protein Homology	0.629

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