CN09_10600 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_10600

Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology (168 aa)

Predicted Functional Partners:

CN09_19725

0.940

CN09_01825

0.888

CN09_05915

0.778

CN09_04260

0.776

CN09_04265

0.775

CN09_08155

0.769

CN09_27500

0.763

CN09_08320

0.762

CN09_15710

0.762

CN09_06920

0.761

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_01825	CN09_08320	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.999
CN09_01825	CN09_10600	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.888
CN09_01825	CN09_19725	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.855
CN09_04260	CN09_04265	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.591
CN09_04260	CN09_05915	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.602
CN09_04260	CN09_06920	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.673
CN09_04260	CN09_08155	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.748
CN09_04260	CN09_08320	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.630
CN09_04260	CN09_10600	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.776
CN09_04260	CN09_15710	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Succinoglycan biosynthesis protein exop; Derived by automated computational analysis using gene prediction method: Protein Homology	0.741
CN09_04260	CN09_27500	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.711
CN09_04265	CN09_04260	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.591
CN09_04265	CN09_05915	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.575
CN09_04265	CN09_06920	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.697
CN09_04265	CN09_08155	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.742
CN09_04265	CN09_08320	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.548
CN09_04265	CN09_10600	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.775
CN09_04265	CN09_15710	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Succinoglycan biosynthesis protein exop; Derived by automated computational analysis using gene prediction method: Protein Homology	0.676
CN09_04265	CN09_27500	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.719
CN09_05915	CN09_04260	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.602