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CN09_10625 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_10625" - C4-dicarboxylate ABC transporter in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_10625C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (588 aa)    
Predicted Functional Partners:
CN09_10630
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (191 aa)
     
  0.998
CN09_10620
ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system (368 aa)
 
     
  0.874
CN09_01585
ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system (368 aa)
 
     
  0.873
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
              0.835
ate
Putative arginyl-tRNA--protein transferase; May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (258 aa)
              0.744
CN09_09660
1-aminocyclopropane-1-carboxylate deaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (385 aa)
              0.744
CN09_18960
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1011 aa)
              0.709
CN09_18725
N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (256 aa)
         
  0.703
CN09_06020
Acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
              0.652
CN09_20890
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)
          0.605
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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