CN09_10770 protein (Agrobacterium rhizogenes)

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gene neighborhood

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Score

CN09_10770

Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology (354 aa)

Predicted Functional Partners:

CN09_10775

0.979

CN09_10780

0.805

CN09_31765

0.769

CN09_01405

0.743

CN09_07270

0.703

macB

0.607

CN09_34005

0.550

CN09_24930

0.543

CN09_08750

0.479

CN09_29010

0.462

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01405	CN09_10770	CN09_01405	CN09_10770	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the major facilitator superfamily	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	0.743
CN09_01405	CN09_24930	CN09_01405	CN09_24930	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the major facilitator superfamily	RND transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.495
CN09_01405	CN09_34005	CN09_01405	CN09_34005	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the major facilitator superfamily	Nodulation protein NodT; Derived by automated computational analysis using gene prediction method- Protein Homology	0.402
CN09_07270	CN09_10770	CN09_07270	CN09_10770	DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the major facilitator superfamily	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	0.703
CN09_07270	CN09_10780	CN09_07270	CN09_10780	DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the major facilitator superfamily	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.446
CN09_08750	CN09_10770	CN09_08750	CN09_10770	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	0.479
CN09_08750	CN09_10780	CN09_08750	CN09_10780	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.718
CN09_10770	CN09_01405	CN09_10770	CN09_01405	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the major facilitator superfamily	0.743
CN09_10770	CN09_07270	CN09_10770	CN09_07270	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the major facilitator superfamily	0.703
CN09_10770	CN09_08750	CN09_10770	CN09_08750	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.479
CN09_10770	CN09_10775	CN09_10770	CN09_10775	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.979
CN09_10770	CN09_10780	CN09_10770	CN09_10780	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.805
CN09_10770	CN09_24930	CN09_10770	CN09_24930	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	RND transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.543
CN09_10770	CN09_29010	CN09_10770	CN09_29010	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	0.462
CN09_10770	CN09_31765	CN09_10770	CN09_31765	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the major facilitator superfamily	0.769
CN09_10770	CN09_34005	CN09_10770	CN09_34005	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	Nodulation protein NodT; Derived by automated computational analysis using gene prediction method- Protein Homology	0.550
CN09_10770	macB	CN09_10770	CN09_25550	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides	0.607
CN09_10775	CN09_10770	CN09_10775	CN09_10770	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology	0.979
CN09_10775	CN09_10780	CN09_10775	CN09_10780	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.871
CN09_10775	CN09_24930	CN09_10775	CN09_24930	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	RND transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.451

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