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CN09_10855 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_10855" - Cytokinin riboside 5'-monophosphate phosphoribohydrolase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_10855Cytokinin riboside 5’-monophosphate phosphoribohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the LOG family (207 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
   
        0.985
CN09_10865
Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method- Protein Homology (668 aa)
              0.877
CN09_17085
Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family (888 aa)
              0.822
CN09_10870
Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (628 aa)
   
        0.821
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
   
        0.817
psd
Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer); Belongs to the phosphatidylserine decarboxylase family. PSD-A subfamily (232 aa)
              0.782
CN09_10885
CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (286 aa)
              0.781
CN09_06555
Isocitrate dehydrogenase [NADP]; Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the isocitrate and isopropylmalate dehydrogenases family (404 aa)
   
        0.768
CN09_16240
Riboflavin biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ribF family (327 aa)
              0.744
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
   
        0.723
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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