CN09_11450 protein (Agrobacterium rhizogenes)

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Predicted Interactions

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protein homology

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Score

CN09_11450

Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily (165 aa)

Predicted Functional Partners:

CN09_11445

0.845

CN09_11435

0.568

ispDF

0.528

CN09_11460

0.500

CN09_13255

0.442

CN09_02575

0.418

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_02575	CN09_11450	CN09_02575	CN09_11450	Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.418
CN09_11435	CN09_11445	CN09_11435	CN09_11445	DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.501
CN09_11435	CN09_11450	CN09_11435	CN09_11450	DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.568
CN09_11435	CN09_11460	CN09_11435	CN09_11460	DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.835
CN09_11445	CN09_11435	CN09_11445	CN09_11435	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.501
CN09_11445	CN09_11450	CN09_11445	CN09_11450	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.845
CN09_11450	CN09_02575	CN09_11450	CN09_02575	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.418
CN09_11450	CN09_11435	CN09_11450	CN09_11435	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.568
CN09_11450	CN09_11445	CN09_11450	CN09_11445	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.845
CN09_11450	CN09_11460	CN09_11450	CN09_11460	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.500
CN09_11450	CN09_13255	CN09_11450	CN09_13255	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.442
CN09_11450	ispDF	CN09_11450	CN09_07765	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF)	0.528
CN09_11460	CN09_11435	CN09_11460	CN09_11435	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.835
CN09_11460	CN09_11450	CN09_11460	CN09_11450	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.500
CN09_13255	CN09_11450	CN09_13255	CN09_11450	NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.442
ispDF	CN09_11450	CN09_07765	CN09_11450	Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF)	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.528

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