CN09_11635 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_11635

Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology (112 aa)

Predicted Functional Partners:

CN09_02265

0.999

CN09_08350

0.788

CN09_16525

0.688

CN09_29415

0.674

CN09_27895

0.665

CN09_06455

0.663

CN09_06475

0.661

CN09_16795

0.660

CN09_01595

0.656

CN09_26325

0.652

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_01595	CN09_06455	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.783
CN09_01595	CN09_06475	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.783
CN09_01595	CN09_08350	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Long-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.602
CN09_01595	CN09_11635	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.656
CN09_01595	CN09_16525	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.783
CN09_01595	CN09_16795	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.750
CN09_01595	CN09_27895	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.783
CN09_01595	CN09_29415	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.714
CN09_02265	CN09_11635	Lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.999
CN09_06455	CN09_01595	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.783
CN09_06455	CN09_06475	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.784
CN09_06455	CN09_08350	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	Long-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.604
CN09_06455	CN09_11635	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.663
CN09_06455	CN09_16525	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.783
CN09_06455	CN09_16795	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.774
CN09_06455	CN09_27895	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.784
CN09_06455	CN09_29415	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.749
CN09_06475	CN09_01595	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.783
CN09_06475	CN09_06455	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.784
CN09_06475	CN09_08350	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Long-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.635