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CN09_12085 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_12085" - Cytochrome C556 in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_12085Cytochrome C556; Derived by automated computational analysis using gene prediction method- Protein Homology (148 aa)    
Predicted Functional Partners:
CN09_12080
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
 
     
  0.918
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (344 aa)
     
   
  0.784
CN09_12115
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (200 aa)
              0.594
CN09_12090
Threonine transporter RhtB; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
              0.547
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (651 aa)
              0.537
CN09_04190
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (424 aa)
           
  0.524
CN09_16585
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (142 aa)
   
          0.445
CN09_12545
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (134 aa)
   
          0.424
CN09_17100
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
   
          0.420
CN09_16650
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (203 aa)
   
          0.419
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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