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CN09_13145 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_13145" - ABC transporter ATP-binding protein in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_13145ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (597 aa)    
Predicted Functional Partners:
dapB
4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (274 aa)
              0.856
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily (211 aa)
              0.780
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
              0.711
CN09_34040
Chaperone protein DnaK; Acts as a chaperone (639 aa)
   
 
 
  0.560
CN09_01860
D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily (331 aa)
 
 
  0.558
CN09_21890
Chaperone protein DnaK; Acts as a chaperone (634 aa)
   
 
 
  0.551
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
   
 
  0.539
glk
Glucokinase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial glucokinase family (340 aa)
              0.529
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] (382 aa)
 
 
 
  0.510
CN09_10660
Permease; Derived by automated computational analysis using gene prediction method- Protein Homology (391 aa)
 
 
 
  0.496
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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