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CN09_13545 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_13545" - MarR family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_13545MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (116 aa)    
Predicted Functional Partners:
CN09_13550
Peptidase P60; Derived by automated computational analysis using gene prediction method- Protein Homology (284 aa)
              0.949
CN09_13540
Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase M17 family (463 aa)
              0.835
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde; Belongs to the NAGSA dehydrogenase family. Type 2 subfamily (310 aa)
              0.732
CN09_17650
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (121 aa)
 
 
 
  0.719
CN09_13535
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (275 aa)
              0.684
CN09_07705
Nitrite reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (104 aa)
   
          0.653
CN09_13555
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (79 aa)
              0.599
CN09_08475
Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (188 aa)
 
     
  0.572
CN09_02085
Thiamine-phosphate pyrophosphorylase; Catalyzes the formation of thiamine monophosphate from 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate and 4-methyl-5-(2-phosphono-oxyethyl)-thiazole; Derived by automated computational analysis using gene prediction method- Protein Homology (217 aa)
 
          0.567
CN09_07155
Phospholipase; Derived by automated computational analysis using gene prediction method- Protein Homology (298 aa)
 
          0.481
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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