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CN09_13920 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_13920" - Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_13920Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily (157 aa)    
Predicted Functional Partners:
CN09_13935
ArsC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ArsC family (117 aa)
 
          0.907
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
              0.863
CN09_04750
Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1258 aa)
              0.838
CN09_13925
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (75 aa)
              0.776
CN09_17085
Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family (888 aa)
              0.768
CN09_13930
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (143 aa)
              0.768
CN09_06305
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source (559 aa)
              0.729
CN09_16300
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (606 aa)
         
  0.702
xerD
Tyrosine recombinase XerD; Derived by automated computational analysis using gene prediction method- Protein Homology (319 aa)
              0.652
plsY
Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP (206 aa)
              0.652
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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