CN09_16235 protein (Agrobacterium rhizogenes)

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Score

CN09_16235

HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (282 aa)

Predicted Functional Partners:

CN09_16240

0.999

ileS

0.779

CN09_15200

0.748

pyrD

0.746

pgi

0.744

CN09_11880

0.744

CN09_01820

0.742

CN09_24525

0.707

CN09_23675

0.707

hisS

0.704

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01820	CN09_11880	CN09_01820	CN09_11880	L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde	UPF0260 protein CN09_11880; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0260 family	0.744
CN09_01820	CN09_16235	CN09_01820	CN09_16235	L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde	HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.742
CN09_01820	CN09_16240	CN09_01820	CN09_16240	L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde	Riboflavin biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ribF family	0.744
CN09_01820	pgi	CN09_01820	CN09_15010	L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde	Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GPI family	0.652
CN09_11880	CN09_01820	CN09_11880	CN09_01820	UPF0260 protein CN09_11880; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0260 family	L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde	0.744
CN09_11880	CN09_16235	CN09_11880	CN09_16235	UPF0260 protein CN09_11880; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0260 family	HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_11880	CN09_16240	CN09_11880	CN09_16240	UPF0260 protein CN09_11880; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0260 family	Riboflavin biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ribF family	0.744
CN09_15200	CN09_16235	CN09_15200	CN09_16235	Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.748
CN09_15200	pyrD	CN09_15200	CN09_15205	Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor	0.961
CN09_16235	CN09_01820	CN09_16235	CN09_01820	HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde	0.742
CN09_16235	CN09_11880	CN09_16235	CN09_11880	HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	UPF0260 protein CN09_11880; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0260 family	0.744
CN09_16235	CN09_15200	CN09_16235	CN09_15200	HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.748
CN09_16235	CN09_16240	CN09_16235	CN09_16240	HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ribF family	0.999
CN09_16235	CN09_23675	CN09_16235	CN09_23675	HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Chain-length determining protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.707
CN09_16235	CN09_24525	CN09_16235	CN09_24525	HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.707
CN09_16235	hisS	CN09_16235	CN09_16180	HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.704
CN09_16235	ileS	CN09_16235	CN09_16270	HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile)	0.779
CN09_16235	pgi	CN09_16235	CN09_15010	HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GPI family	0.744
CN09_16235	pyrD	CN09_16235	CN09_15205	HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor	0.746
CN09_16240	CN09_01820	CN09_16240	CN09_01820	Riboflavin biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ribF family	L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde	0.744

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