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CN09_16385 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_16385" - 3-oxoacyl-ACP reductase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_163853-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (256 aa)    
Predicted Functional Partners:
CN09_16380
2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
 
     
  0.995
CN09_16370
Gluconolaconase; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
 
     
  0.994
CN09_16375
2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
 
     
  0.965
CN09_16390
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
 
   
  0.886
CN09_23850
Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (380 aa)
 
          0.830
CN09_29310
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer (341 aa)
 
     
  0.791
CN09_20410
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method- Protein Homology (696 aa)
         
  0.747
CN09_20400
Beta-galactosidase; Derived by automated computational analysis using gene prediction method- Protein Homology (644 aa)
         
  0.746
CN09_03580
GguC protein; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
 
     
  0.645
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
   
 
  0.527
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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