Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CN09_03420 | CN09_16640 | CN09_03420 | CN09_16640 | Phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.963 |
| CN09_04790 | CN09_06580 | CN09_04790 | CN09_06580 | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate | Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.974 |
| CN09_04790 | CN09_16640 | CN09_04790 | CN09_16640 | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate | 2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.970 |
| CN09_04790 | CN09_16975 | CN09_04790 | CN09_16975 | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate | Belongs to the peptidase M16 family | 0.980 |
| CN09_04790 | atpD | CN09_04790 | CN09_27875 | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate | Atp synthase f0f1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits | 0.994 |
| CN09_04790 | atpE | CN09_04790 | CN09_16430 | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate | F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation | 0.991 |
| CN09_04790 | lldD | CN09_04790 | CN09_03700 | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate | Lactate dehydrogenase; Flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.974 |
| CN09_06580 | CN09_04790 | CN09_06580 | CN09_04790 | Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate | 0.974 |
| CN09_06580 | CN09_16640 | CN09_06580 | CN09_16640 | Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.970 |
| CN09_06580 | CN09_16975 | CN09_06580 | CN09_16975 | Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Belongs to the peptidase M16 family | 0.959 |
| CN09_06580 | atpD | CN09_06580 | CN09_27875 | Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Atp synthase f0f1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits | 0.983 |
| CN09_06580 | atpE | CN09_06580 | CN09_16430 | Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation | 0.971 |
| CN09_06580 | ubiA | CN09_06580 | CN09_16615 | Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate | 0.974 |
| CN09_16640 | CN09_03420 | CN09_16640 | CN09_03420 | 2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.963 |
| CN09_16640 | CN09_04790 | CN09_16640 | CN09_04790 | 2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate | 0.970 |
| CN09_16640 | CN09_06580 | CN09_16640 | CN09_06580 | 2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.970 |
| CN09_16640 | CN09_16645 | CN09_16640 | CN09_16645 | 2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Translation factor sua5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine | 0.999 |
| CN09_16640 | CN09_16975 | CN09_16640 | CN09_16975 | 2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Belongs to the peptidase M16 family | 0.978 |
| CN09_16640 | CN09_27385 | CN09_16640 | CN09_27385 | 2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.963 |
| CN09_16640 | atpD | CN09_16640 | CN09_27875 | 2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Atp synthase f0f1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits | 0.973 |
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