CN09_16930 protein (Agrobacterium rhizogenes)

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Score

CN09_16930

ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)

Predicted Functional Partners:

CN09_16925

0.989

CN09_16920

0.973

polA

0.890

CN09_33890

0.869

CN09_33885

0.869

CN09_33875

0.848

pheT

0.708

CN09_05930

0.613

CN09_05940

0.577

CN09_15390

0.489

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_05930	CN09_05940	CN09_05930	CN09_05940	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.989
CN09_05930	CN09_16920	CN09_05930	CN09_16920	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 9 family	0.442
CN09_05930	CN09_16925	CN09_05930	CN09_16925	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.616
CN09_05930	CN09_16930	CN09_05930	CN09_16930	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.613
CN09_05930	CN09_33875	CN09_05930	CN09_33875	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 9 family	0.448
CN09_05930	CN09_33885	CN09_05930	CN09_33885	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.691
CN09_05930	CN09_33890	CN09_05930	CN09_33890	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.713
CN09_05930	polA	CN09_05930	CN09_13050	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.758
CN09_05940	CN09_05930	CN09_05940	CN09_05930	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.989
CN09_05940	CN09_15390	CN09_05940	CN09_15390	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	0.420
CN09_05940	CN09_16920	CN09_05940	CN09_16920	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 9 family	0.690
CN09_05940	CN09_16930	CN09_05940	CN09_16930	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.577
CN09_05940	CN09_33875	CN09_05940	CN09_33875	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 9 family	0.732
CN09_05940	CN09_33885	CN09_05940	CN09_33885	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.493
CN09_05940	pheT	CN09_05940	CN09_13825	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	0.424
CN09_05940	polA	CN09_05940	CN09_13050	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.779
CN09_15390	CN09_05940	CN09_15390	CN09_05940	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.420
CN09_15390	CN09_16920	CN09_15390	CN09_16920	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 9 family	0.798
CN09_15390	CN09_16925	CN09_15390	CN09_16925	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.420
CN09_15390	CN09_16930	CN09_15390	CN09_16930	Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily	ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.489

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