CN09_16930 protein (Agrobacterium rhizogenes)

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Predicted Interactions

gene neighborhood

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protein homology

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[Homology]

Score

CN09_16930

ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology (260 aa)

Predicted Functional Partners:

CN09_16925

0.998

CN09_33885

0.984

CN09_33890

0.983

CN09_16755

0.978

CN09_16920

0.974

CN09_03325

0.950

znuB

0.939

polA

0.890

CN09_33875

0.850

CN09_25040

0.842

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_03325	CN09_16925	CN09_03325	CN09_16925	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.548
CN09_03325	CN09_16930	CN09_03325	CN09_16930	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.950
CN09_03325	CN09_25040	CN09_03325	CN09_25040	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.840
CN09_03325	CN09_33885	CN09_03325	CN09_33885	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.548
CN09_03325	CN09_33890	CN09_03325	CN09_33890	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.548
CN09_03325	znuB	CN09_03325	CN09_05940	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.548
CN09_16755	CN09_16925	CN09_16755	CN09_16925	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.898
CN09_16755	CN09_16930	CN09_16755	CN09_16930	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.978
CN09_16755	CN09_33885	CN09_16755	CN09_33885	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.898
CN09_16755	CN09_33890	CN09_16755	CN09_33890	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.898
CN09_16755	znuB	CN09_16755	CN09_05940	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.898
CN09_16920	CN09_16925	CN09_16920	CN09_16925	Metal abc transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.987
CN09_16920	CN09_16930	CN09_16920	CN09_16930	Metal abc transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.974
CN09_16920	CN09_33885	CN09_16920	CN09_33885	Metal abc transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.933
CN09_16920	CN09_33890	CN09_16920	CN09_33890	Metal abc transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.903
CN09_16920	polA	CN09_16920	CN09_13050	Metal abc transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	0.847
CN09_16920	znuB	CN09_16920	CN09_05940	Metal abc transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.684
CN09_16925	CN09_03325	CN09_16925	CN09_03325	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.548
CN09_16925	CN09_16755	CN09_16925	CN09_16755	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.898
CN09_16925	CN09_16920	CN09_16925	CN09_16920	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Metal abc transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family	0.987

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