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CN09_17670 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_17670" - Exclusion suppressor FxsA in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_17670Exclusion suppressor FxsA; Derived by automated computational analysis using gene prediction method- Protein Homology (178 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
              0.999
secB
Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA (157 aa)
              0.881
CN09_17665
Calcium-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (233 aa)
              0.867
CN09_17660
Transglycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology (372 aa)
              0.867
CN09_17655
DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method- Protein Homology (199 aa)
              0.867
CN09_17650
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (121 aa)
              0.867
CN09_32255
NADH oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (341 aa)
              0.854
CN09_18515
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (601 aa)
   
        0.660
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps; Belongs to the HMBS family (309 aa)
              0.652
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA (303 aa)
              0.652
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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