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CN09_18395 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_18395" - Cytidine deaminase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_18395Cytidine deaminase; Derived by automated computational analysis using gene prediction method- Protein Homology (201 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
         
  0.958
CN09_18390
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1499 aa)
 
        0.876
CN09_18405
Uridine phosphorylase; Derived by automated computational analysis using gene prediction method- Protein Homology (277 aa)
         
  0.849
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (520 aa)
   
   
  0.837
CN09_18400
Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
         
  0.833
CN09_18410
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (324 aa)
              0.774
CN09_16300
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (606 aa)
              0.772
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (494 aa)
   
   
  0.736
CN09_18420
Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (277 aa)
   
        0.705
CN09_18415
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (270 aa)
              0.695
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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