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CN09_18495 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_18495" - Pimeloyl-CoA dehydrogenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
CN09_18495Pimeloyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the pirin family (311 aa)    
Predicted Functional Partners:
CN09_16300
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (606 aa)
              0.858
CN09_33210
Hydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0312 family (444 aa)
              0.763
CN09_18490
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (296 aa)
     
 
  0.583
CN09_31385
Aromatic ring-cleaving dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
 
   
  0.511
CN09_18480
Amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (220 aa)
   
        0.499
CN09_18485
Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology (343 aa)
              0.455
CN09_31790
Nuclease PIN; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the pirin family (254 aa)
 
     
0.422
CN09_23665
NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (186 aa)
 
        0.417
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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