CN09_19025 protein (Agrobacterium rhizogenes)

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protein homology

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Score

CN09_19025

ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family (281 aa)

Predicted Functional Partners:

CN09_19005

0.908

CN09_19000

0.892

CN09_26545

0.825

CN09_18995

0.820

CN09_26550

0.792

CN09_06165

0.788

CN09_06160

0.742

CN09_21705

0.726

glnP

0.721

CN09_31550

0.716

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_06160	CN09_06165	CN09_06160	CN09_06165	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.937
CN09_06160	CN09_18995	CN09_06160	CN09_18995	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.795
CN09_06160	CN09_19005	CN09_06160	CN09_19005	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.725
CN09_06160	CN09_19025	CN09_06160	CN09_19025	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	0.742
CN09_06160	CN09_26545	CN09_06160	CN09_26545	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.622
CN09_06165	CN09_06160	CN09_06165	CN09_06160	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.937
CN09_06165	CN09_18995	CN09_06165	CN09_18995	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.819
CN09_06165	CN09_19000	CN09_06165	CN09_19000	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.521
CN09_06165	CN09_19025	CN09_06165	CN09_19025	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	0.788
CN09_06165	CN09_26550	CN09_06165	CN09_26550	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.609
CN09_18995	CN09_06160	CN09_18995	CN09_06160	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.795
CN09_18995	CN09_06165	CN09_18995	CN09_06165	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.819
CN09_18995	CN09_19000	CN09_18995	CN09_19000	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.963
CN09_18995	CN09_19005	CN09_18995	CN09_19005	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.966
CN09_18995	CN09_19025	CN09_18995	CN09_19025	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	0.820
CN09_18995	CN09_21705	CN09_18995	CN09_21705	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.735
CN09_18995	CN09_26545	CN09_18995	CN09_26545	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.840
CN09_18995	CN09_26550	CN09_18995	CN09_26550	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.828
CN09_18995	CN09_31550	CN09_18995	CN09_31550	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.731
CN09_18995	glnP	CN09_18995	CN09_32360	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology	0.701

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