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CN09_19725 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_19725" - ATPase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_19725ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (1199 aa)    
Predicted Functional Partners:
pleD
Response regulator PleD; Involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; Derived by automated computational analysis using gene prediction method- Protein Homology (457 aa)
   
 
  0.999
CN09_12395
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (601 aa)
   
 
  0.999
CN09_03065
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (1129 aa)
     
 
  0.999
CN09_04245
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (788 aa)
     
 
  0.999
CN09_15420
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method- Protein Homology (763 aa)
         
  0.999
CN09_03650
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (1086 aa)
     
 
0.999
CN09_19775
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
   
   
  0.999
CN09_19720
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (213 aa)
 
     
  0.998
CN09_19710
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (231 aa)
 
     
  0.998
CN09_19715
Regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (125 aa)
 
     
  0.998
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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