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CN09_20100 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_20100" - N-acetylglucosamine kinase in Agrobacterium rhizogenes
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_20100N-acetylglucosamine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (308 aa)    
Predicted Functional Partners:
CN09_04755
Phage tail protein; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
         
  0.999
CN09_29320
Aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (343 aa)
              0.999
cutC
Copper homeostasis protein CutC; Participates in the control of copper homeostasis (236 aa)
 
     
  0.972
CN09_29325
N-acetylglucosamine-6-phosphate deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. NagA family (385 aa)
 
     
  0.738
CN09_20105
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (446 aa)
         
  0.643
CN09_20110
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (219 aa)
         
  0.640
CN09_20115
Ribose ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the RbsD / FucU family (151 aa)
 
          0.536
CN09_20090
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
              0.523
CN09_17085
Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family (888 aa)
     
 
  0.502
CN09_03540
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)
 
     
  0.461
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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