Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CN09_21415 | CN09_21420 | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.511 |
CN09_21420 | CN09_21415 | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.511 |
CN09_21420 | CN09_21425 | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.580 |
CN09_21420 | CN09_21430 | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | DNA polymerase beta subunit; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.466 |
CN09_21420 | CN09_21435 | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.476 |
CN09_21420 | CN09_22795 | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway | 0.411 |
CN09_21425 | CN09_21420 | Alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.580 |
CN09_21425 | CN09_21430 | Alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology | DNA polymerase beta subunit; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.783 |
CN09_21425 | CN09_21435 | Alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology | Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.795 |
CN09_21430 | CN09_21420 | DNA polymerase beta subunit; Derived by automated computational analysis using gene prediction method: Protein Homology | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.466 |
CN09_21430 | CN09_21425 | DNA polymerase beta subunit; Derived by automated computational analysis using gene prediction method: Protein Homology | Alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.783 |
CN09_21430 | CN09_21435 | DNA polymerase beta subunit; Derived by automated computational analysis using gene prediction method: Protein Homology | Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.597 |
CN09_21435 | CN09_21420 | Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.476 |
CN09_21435 | CN09_21425 | Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | Alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.795 |
CN09_21435 | CN09_21430 | Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | DNA polymerase beta subunit; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.597 |
CN09_22795 | CN09_21420 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway | LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.411 |