CN09_22380 protein (Agrobacterium rhizogenes)

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second shell of interactors

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_22380

Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology (189 aa)

Predicted Functional Partners:

CN09_22385

0.757

CN09_04545

0.623

CN09_25430

0.611

CN09_34310

0.608

CN09_15710

0.578

CN09_05530

0.568

CN09_03935

0.564

CN09_28835

0.561

CN09_30620

0.541

CN09_30500

0.539

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_03935	CN09_04545	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.772
CN09_03935	CN09_15710	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Succinoglycan biosynthesis protein exop; Derived by automated computational analysis using gene prediction method: Protein Homology	0.748
CN09_03935	CN09_22380	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.564
CN09_03935	CN09_25430	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Acetone carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.435
CN09_03935	CN09_30500	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.511
CN09_03935	CN09_30620	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.523
CN09_03935	CN09_34310	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.763
CN09_04545	CN09_03935	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.772
CN09_04545	CN09_05530	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.685
CN09_04545	CN09_15710	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Succinoglycan biosynthesis protein exop; Derived by automated computational analysis using gene prediction method: Protein Homology	0.770
CN09_04545	CN09_22380	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.623
CN09_04545	CN09_25430	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Acetone carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.743
CN09_04545	CN09_30500	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.759
CN09_04545	CN09_30620	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.740
CN09_04545	CN09_34310	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.784
CN09_05530	CN09_04545	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.685
CN09_05530	CN09_22380	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.568
CN09_05530	CN09_25430	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Acetone carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.758
CN09_05530	CN09_30500	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.756
CN09_05530	CN09_30620	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.751