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CN09_22700 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_22700" - Diguanylate cyclase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_22700Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (526 aa)    
Predicted Functional Partners:
CN09_22705
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
 
 
  0.936
CN09_22710
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (305 aa)
 
   
  0.929
CN09_22730
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (321 aa)
 
          0.905
CN09_22735
Choline kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (311 aa)
 
          0.883
CN09_22715
Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (612 aa)
 
   
  0.837
CN09_18705
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
 
 
  0.803
CN09_18680
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)
 
          0.783
CN09_18700
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
 
   
  0.782
CN09_18675
Choline kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)
 
          0.763
CN09_22725
Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (430 aa)
 
     
  0.710
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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