CN09_24260 protein (Agrobacterium rhizogenes)

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gene neighborhood

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textmining

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protein homology

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[Homology]

Score

CN09_24260

MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology (438 aa)

Predicted Functional Partners:

CN09_24255

0.749

CN09_24265

0.702

CN09_24245

0.689

CN09_24250

0.667

CN09_05195

0.657

CN09_24240

0.618

CN09_01270

0.580

CN09_28705

0.552

CN09_00175

0.514

CN09_23790

0.511

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_00175	CN09_01270	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.881
CN09_00175	CN09_05195	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology	Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.881
CN09_00175	CN09_24245	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology	Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.424
CN09_00175	CN09_24260	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.514
CN09_01270	CN09_00175	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.881
CN09_01270	CN09_05195	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.999
CN09_01270	CN09_23790	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.881
CN09_01270	CN09_24260	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.580
CN09_05195	CN09_00175	Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.881
CN09_05195	CN09_01270	Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.999
CN09_05195	CN09_23790	Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.881
CN09_05195	CN09_24260	Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.657
CN09_23790	CN09_01270	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.881
CN09_23790	CN09_05195	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology	Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.881
CN09_23790	CN09_24245	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology	Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.401
CN09_23790	CN09_24260	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.511
CN09_24240	CN09_24245	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology	Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.990
CN09_24240	CN09_24250	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology	Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family	0.913
CN09_24240	CN09_24255	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology	3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.945
CN09_24240	CN09_24260	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.618