CN09_24280 protein (Agrobacterium rhizogenes)

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Score

CN09_24280

ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology (221 aa)

Predicted Functional Partners:

CN09_24285

0.968

CN09_24270

0.966

CN09_24275

0.946

CN09_24295

0.860

CN09_21640

0.771

CN09_30990

0.765

CN09_31980

0.762

CN09_31545

0.745

CN09_26760

0.744

CN09_21715

0.743

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_21640	CN09_24275	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.736
CN09_21640	CN09_24280	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.771
CN09_21715	CN09_24275	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.691
CN09_21715	CN09_24280	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.743
CN09_24270	CN09_24275	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.967
CN09_24270	CN09_24280	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.966
CN09_24270	CN09_24285	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.914
CN09_24270	CN09_24295	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.929
CN09_24270	CN09_26760	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.423
CN09_24270	CN09_30990	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.416
CN09_24270	CN09_31980	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology	0.406
CN09_24275	CN09_21640	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.736
CN09_24275	CN09_21715	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.691
CN09_24275	CN09_24270	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family	0.967
CN09_24275	CN09_24280	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.946
CN09_24275	CN09_24285	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.967
CN09_24275	CN09_24295	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.877
CN09_24275	CN09_26760	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.707
CN09_24275	CN09_30990	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.729
CN09_24275	CN09_31545	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.704