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CN09_24295 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_24295" - IclR family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
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[Homology]
Score
CN09_24295IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)    
Predicted Functional Partners:
CN09_24270
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (282 aa)
 
          0.929
CN09_24290
Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
 
          0.925
CN09_24275
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (220 aa)
 
          0.877
CN09_24280
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (221 aa)
 
          0.860
CN09_13665
Alanine racemase; Derived by automated computational analysis using gene prediction method- Protein Homology (367 aa)
 
          0.731
CN09_24285
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (256 aa)
 
          0.675
CN09_03850
2-dehydro-3-deoxygluconokinase; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)
 
     
  0.641
CN09_26915
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (688 aa)
 
          0.597
CN09_22360
Urea carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (1178 aa)
              0.582
CN09_26925
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (346 aa)
 
          0.549
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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