CN09_24600 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_24600

Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology (357 aa)

Predicted Functional Partners:

CN09_03445

0.623

CN09_24595

0.574

CN09_02300

0.565

CN09_24605

0.549

CN09_24650

0.549

CN09_17155

0.538

CN09_30110

0.529

CN09_25750

0.519

CN09_23075

0.510

CN09_24640

0.481

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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node1	node2	node1 annotation	node2 annotation	score
CN09_02300	CN09_24600	Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.565
CN09_03445	CN09_24600	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.623
CN09_17155	CN09_24600	Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.538
CN09_23075	CN09_24600	Flavin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.510
CN09_24595	CN09_24600	Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.574
CN09_24600	CN09_02300	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.565
CN09_24600	CN09_03445	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.623
CN09_24600	CN09_17155	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.538
CN09_24600	CN09_23075	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Flavin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.510
CN09_24600	CN09_24595	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.574
CN09_24600	CN09_24605	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.549
CN09_24600	CN09_24640	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.481
CN09_24600	CN09_24650	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.549
CN09_24600	CN09_25750	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.519
CN09_24600	CN09_30110	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.529
CN09_24605	CN09_24600	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.549
CN09_24605	CN09_24640	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.506
CN09_24605	CN09_24650	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.559
CN09_24640	CN09_24600	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology	Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.481
CN09_24640	CN09_24605	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.506