CN09_24700 protein (Agrobacterium rhizogenes)

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CN09_24700

Aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (450 aa)

Predicted Functional Partners:

CN09_10375

0.909

ribB

0.856

CN09_24695

0.818

CN09_24705

0.726

CN09_24715

0.725

CN09_24710

0.725

CN09_24680

0.645

CN09_24720

0.622

bioB

0.578

CN09_03210

0.571

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_03210	CN09_10375	CN09_03210	CN09_10375	Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	0.996
CN09_03210	CN09_24700	CN09_03210	CN09_24700	Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method- Protein Homology	Aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	0.571
CN09_03210	ribB	CN09_03210	CN09_16765	Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method- Protein Homology	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family	0.999
CN09_10375	CN09_03210	CN09_10375	CN09_03210	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method- Protein Homology	0.996
CN09_10375	CN09_24700	CN09_10375	CN09_24700	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	0.909
CN09_10375	bioB	CN09_10375	CN09_02345	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family	0.899
CN09_10375	ribB	CN09_10375	CN09_16765	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family	0.999
CN09_24680	CN09_24695	CN09_24680	CN09_24695	4-aminobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	Glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.628
CN09_24680	CN09_24700	CN09_24680	CN09_24700	4-aminobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	Aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	0.645
CN09_24680	CN09_24705	CN09_24680	CN09_24705	4-aminobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily	0.480
CN09_24680	CN09_24710	CN09_24680	CN09_24710	4-aminobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.571
CN09_24680	CN09_24715	CN09_24680	CN09_24715	4-aminobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.501
CN09_24680	CN09_24720	CN09_24680	CN09_24720	4-aminobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.405
CN09_24680	ribB	CN09_24680	CN09_16765	4-aminobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family	0.420
CN09_24695	CN09_24680	CN09_24695	CN09_24680	Glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	4-aminobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	0.628
CN09_24695	CN09_24700	CN09_24695	CN09_24700	Glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	0.818
CN09_24695	CN09_24705	CN09_24695	CN09_24705	Glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily	0.702
CN09_24695	CN09_24710	CN09_24695	CN09_24710	Glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.704
CN09_24695	CN09_24715	CN09_24695	CN09_24715	Glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.704
CN09_24695	CN09_24720	CN09_24695	CN09_24720	Glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.551

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