CN09_27370 protein (Agrobacterium rhizogenes)

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experimentally determined

Predicted Interactions

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Score

CN09_27370

MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (432 aa)

Predicted Functional Partners:

CN09_20855

0.779

mtgA

0.731

CN09_27365

0.697

CN09_12230

0.655

CN09_08520

0.468

CN09_24995

0.460

CN09_29470

0.448

CN09_05195

0.448

CN09_23790

0.440

CN09_00175

0.440

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_00175	CN09_05195	CN09_00175	CN09_05195	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	Major facilitator transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.881
CN09_00175	CN09_27370	CN09_00175	CN09_27370	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.440
CN09_00175	CN09_29470	CN09_00175	CN09_29470	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.498
CN09_05195	CN09_00175	CN09_05195	CN09_00175	Major facilitator transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.881
CN09_05195	CN09_23790	CN09_05195	CN09_23790	Major facilitator transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.881
CN09_05195	CN09_27370	CN09_05195	CN09_27370	Major facilitator transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.448
CN09_08520	CN09_27370	CN09_08520	CN09_27370	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.468
CN09_12230	CN09_27370	CN09_12230	CN09_27370	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.655
CN09_20855	CN09_27370	CN09_20855	CN09_27370	Chemotaxis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.779
CN09_23790	CN09_05195	CN09_23790	CN09_05195	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	Major facilitator transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.881
CN09_23790	CN09_27370	CN09_23790	CN09_27370	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.440
CN09_23790	CN09_29470	CN09_23790	CN09_29470	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.498
CN09_24995	CN09_27370	CN09_24995	CN09_27370	Acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.460
CN09_27365	CN09_27370	CN09_27365	CN09_27370	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.697
CN09_27370	CN09_00175	CN09_27370	CN09_00175	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.440
CN09_27370	CN09_05195	CN09_27370	CN09_05195	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Major facilitator transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.448
CN09_27370	CN09_08520	CN09_27370	CN09_08520	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.468
CN09_27370	CN09_12230	CN09_27370	CN09_12230	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.655
CN09_27370	CN09_20855	CN09_27370	CN09_20855	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Chemotaxis protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.779
CN09_27370	CN09_23790	CN09_27370	CN09_23790	MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Galactarate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.440

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