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CN09_27535 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27535" - Antitoxin in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_27535Antitoxin; Antitoxin component of a toxin-antitoxin (TA) module (82 aa)    
Predicted Functional Partners:
CN09_27540
RelE toxin; Derived by automated computational analysis using gene prediction method- Protein Homology (93 aa)
 
 
 
  0.990
CN09_18560
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1702 aa)
              0.700
CN09_27530
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (337 aa)
              0.631
CN09_17075
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (111 aa)
 
     
  0.541
CN09_17080
Plasmid maintenance system killer; Derived by automated computational analysis using gene prediction method- Protein Homology (96 aa)
 
     
  0.532
CN09_23010
Ribonuclease VapC; Toxic component of a toxin-antitoxin (TA) module. An RNase (133 aa)
 
     
  0.478
CN09_27525
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides (177 aa)
              0.478
CN09_09795
Antitoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (81 aa)
 
     
  0.446
CN09_06240
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (535 aa)
              0.446
CN09_06875
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (88 aa)
 
          0.438
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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