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CN09_27865 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_27865" - Transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
CN09_27865Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (299 aa)    
Predicted Functional Partners:
CN09_27860
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (381 aa)
 
     
  0.759
CN09_27850
Isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family (373 aa)
 
     
  0.716
CN09_04795
Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (228 aa)
 
   
  0.628
CN09_27855
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the aldehyde dehydrogenase family (499 aa)
         
  0.611
CN09_24935
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
   
          0.605
CN09_27310
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
   
          0.589
CN09_03180
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (111 aa)
   
          0.561
CN09_07205
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (303 aa)
   
          0.554
CN09_31800
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (289 aa)
   
          0.553
CN09_31775
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
   
          0.538
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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