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ndvA protein (Agrobacterium rhizogenes) - STRING interaction network
"ndvA" - Beta-(1-->2)glucan export ATP-binding/permease protein NdvA in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
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ndvABeta-(1-->2)glucan export ATP-binding/permease protein NdvA; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP- binding domain (NBD) is responsible for energy generation (589 aa)    
Predicted Functional Partners:
CN09_29580
Protein ndvB; Derived by automated computational analysis using gene prediction method- Protein Homology (2836 aa)
 
     
  0.920
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
              0.711
CN09_16790
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method- Protein Homology (382 aa)
 
 
 
  0.557
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
   
 
  0.539
CN09_16795
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (152 aa)
 
          0.492
thrS
Threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction- L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) (662 aa)
 
     
  0.477
CN09_01860
D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily (331 aa)
   
 
  0.459
CN09_05895
FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis- addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method- Protein Homology (401 aa)
 
     
  0.454
CN09_17100
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
   
          0.450
CN09_16775
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (86 aa)
   
          0.440
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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