CN09_29620 protein (Agrobacterium rhizogenes)

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experimentally determined

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protein homology

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[Homology]

Score

CN09_29620

ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology (546 aa)

Predicted Functional Partners:

CN09_29615

0.963

CN09_29610

0.962

CN09_29600

0.951

CN09_29605

0.944

CN09_29625

0.848

CN09_23180

0.791

CN09_29960

0.789

CN09_29955

0.788

cysA

0.762

CN09_23185

0.755

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_23180	CN09_23185	CN09_23180	CN09_23185	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	0.973
CN09_23180	CN09_29600	CN09_23180	CN09_29600	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.563
CN09_23180	CN09_29605	CN09_23180	CN09_29605	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.679
CN09_23180	CN09_29610	CN09_23180	CN09_29610	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	0.833
CN09_23180	CN09_29620	CN09_23180	CN09_29620	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.791
CN09_23180	CN09_29955	CN09_23180	CN09_29955	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	0.844
CN09_23185	CN09_23180	CN09_23185	CN09_23180	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.973
CN09_23185	CN09_29600	CN09_23185	CN09_29600	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.609
CN09_23185	CN09_29605	CN09_23185	CN09_29605	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.757
CN09_23185	CN09_29615	CN09_23185	CN09_29615	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.832
CN09_23185	CN09_29620	CN09_23185	CN09_29620	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.755
CN09_23185	CN09_29960	CN09_23185	CN09_29960	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.835
CN09_29600	CN09_23180	CN09_29600	CN09_23180	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.563
CN09_29600	CN09_23185	CN09_29600	CN09_23185	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	0.609
CN09_29600	CN09_29605	CN09_29600	CN09_29605	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.925
CN09_29600	CN09_29610	CN09_29600	CN09_29610	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	0.969
CN09_29600	CN09_29615	CN09_29600	CN09_29615	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology	0.963
CN09_29600	CN09_29620	CN09_29600	CN09_29620	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.951
CN09_29600	CN09_29625	CN09_29600	CN09_29625	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.781
CN09_29600	CN09_29955	CN09_29600	CN09_29955	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology	0.696

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