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CN09_29750 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_29750" - Ribonuclease VapC in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_29750Ribonuclease VapC; Toxic component of a toxin-antitoxin (TA) module. An RNase (139 aa)    
Predicted Functional Partners:
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (520 aa)
              0.999
CN09_29745
Antitoxin; Antitoxin component of a toxin-antitoxin (TA) module (79 aa)
 
     
  0.980
CN09_17560
Chlorosome protein; Derived by automated computational analysis using gene prediction method- Protein Homology (503 aa)
              0.817
CN09_17570
Recombinase RecB; Derived by automated computational analysis using gene prediction method- Protein Homology (1063 aa)
              0.806
CN09_29755
Integrase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ’phage’ integrase family (385 aa)
              0.591
CN09_13460
Adenine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism (322 aa)
              0.528
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (233 aa)
              0.526
CN09_28010
Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family (259 aa)
              0.452
CN09_22275
Antitoxin; Antitoxin component of a toxin-antitoxin (TA) module (88 aa)
 
     
  0.432
CN09_33725
Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method- Protein Homology (204 aa)
   
          0.421
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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