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CN09_31680 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_31680" - ABC transporter permease in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
CN09_31680ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (221 aa)    
Predicted Functional Partners:
CN09_31675
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (275 aa)
   
  0.983
CN09_31685
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (218 aa)
     
0.978
CN09_31690
Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
 
  0.971
CN09_26500
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (290 aa)
   
  0.838
CN09_21640
Amino acid transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (269 aa)
 
 
  0.821
CN09_31980
Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
 
 
  0.811
CN09_31545
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
 
 
  0.800
CN09_24845
Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (262 aa)
 
 
  0.793
CN09_00190
Phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
 
 
  0.793
CN09_21715
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
 
  0.791
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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