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CN09_32080 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_32080" - Histidine kinase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
CN09_32080Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (766 aa)    
Predicted Functional Partners:
CN09_12395
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (601 aa)
 
 
 
0.653
CN09_32940
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (949 aa)
 
 
  0.520
CN09_15420
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method- Protein Homology (763 aa)
 
 
 
  0.517
CN09_10105
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (417 aa)
 
 
0.490
CN09_22105
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (578 aa)
 
 
 
0.481
CN09_03125
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (285 aa)
 
 
0.475
CN09_19725
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (1199 aa)
     
 
0.470
CN09_12930
Kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (289 aa)
 
 
 
0.467
CN09_06235
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (355 aa)
 
 
 
0.459
CN09_16715
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (342 aa)
 
 
 
0.458
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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