STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725485_00417Unannotated protein. (257 aa)    
Predicted Functional Partners:
GCA_000725485_00418
Unannotated protein.
 
     0.942
GCA_000725485_01353
Unannotated protein.
  
 
 0.927
GCA_000725485_03161
Unannotated protein.
 
 
 0.835
GCA_000725485_02070
Unannotated protein.
 
 
 0.834
GCA_000725485_03753
Unannotated protein.
  
  
  0.732
GCA_000725485_03061
Unannotated protein.
   
    0.728
GCA_000725485_03984
Unannotated protein.
    
  0.719
GCA_000725485_07839
Unannotated protein.
    
  0.706
GCA_000725485_07122
Unannotated protein.
   
 
  0.695
GCA_000725485_03993
Unannotated protein.
    
  0.686
Your Current Organism:
Nonomuraea candida
NCBI taxonomy Id: 359159
Other names: DSM 45086, JCM 15928, N. candida, NRRL B-24552, Nonomuraea candida le Roes and Meyers 2009, strain HMC10
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.