STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725485_00526Unannotated protein. (262 aa)    
Predicted Functional Partners:
GCA_000725485_00524
Unannotated protein.
    
  0.694
GCA_000725485_00160
Unannotated protein.
  
 
 0.665
GCA_000725485_00884
Unannotated protein.
  
 
 0.665
GCA_000725485_01552
Unannotated protein.
  
 
 0.665
GCA_000725485_03246
Unannotated protein.
  
 
 0.655
GCA_000725485_02274
Unannotated protein.
      
 0.617
GCA_000725485_00525
Unannotated protein.
       0.568
GCA_000725485_04617
Unannotated protein.
   
 
 0.529
GCA_000725485_06407
Unannotated protein.
  
   0.519
GCA_000725485_03649
Unannotated protein.
   
 
 0.517
Your Current Organism:
Nonomuraea candida
NCBI taxonomy Id: 359159
Other names: DSM 45086, JCM 15928, N. candida, NRRL B-24552, Nonomuraea candida le Roes and Meyers 2009, strain HMC10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.