STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725485_01613Unannotated protein. (545 aa)    
Predicted Functional Partners:
GCA_000725485_01612
Unannotated protein.
 
    0.890
GCA_000725485_07146
Unannotated protein.
  
  
  0.837
GCA_000725485_00213
Unannotated protein.
  
 
 0.835
GCA_000725485_02760
Unannotated protein.
  
 
 0.832
GCA_000725485_02052
Unannotated protein.
   
 0.829
GCA_000725485_00334
Unannotated protein.
  
 
 0.809
GCA_000725485_01138
Unannotated protein.
  
 
 0.790
GCA_000725485_02314
Unannotated protein.
 
     0.780
GCA_000725485_07564
Unannotated protein.
  
    0.776
GCA_000725485_07566
Unannotated protein.
  
    0.776
Your Current Organism:
Nonomuraea candida
NCBI taxonomy Id: 359159
Other names: DSM 45086, JCM 15928, N. candida, NRRL B-24552, Nonomuraea candida le Roes and Meyers 2009, strain HMC10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.