STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725485_02144Unannotated protein. (192 aa)    
Predicted Functional Partners:
GCA_000725485_02143
Unannotated protein.
 
 
 0.986
GCA_000725485_02140
Unannotated protein.
 
   
 0.845
GCA_000725485_02141
Unannotated protein.
 
  
 0.831
GCA_000725485_02142
Unannotated protein.
       0.773
GCA_000725485_05025
Unannotated protein.
    
 0.757
GCA_000725485_00600
Unannotated protein.
  
 
 0.721
GCA_000725485_00334
Unannotated protein.
   
 
 0.702
GCA_000725485_07700
Unannotated protein.
    
  0.640
GCA_000725485_00289
Unannotated protein.
    
  0.588
GCA_000725485_02139
Unannotated protein.
       0.554
Your Current Organism:
Nonomuraea candida
NCBI taxonomy Id: 359159
Other names: DSM 45086, JCM 15928, N. candida, NRRL B-24552, Nonomuraea candida le Roes and Meyers 2009, strain HMC10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.