STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725485_09164Unannotated protein. (1238 aa)    
Predicted Functional Partners:
GCA_000725485_07743
Unannotated protein.
    
 0.931
GCA_000725485_06029
Unannotated protein.
    
 0.927
GCA_000725485_03708
Unannotated protein.
   
 0.893
GCA_000725485_00704
Unannotated protein.
   
  0.891
GCA_000725485_01928
Unannotated protein.
   
  0.866
GCA_000725485_06828
Unannotated protein.
    
  0.858
GCA_000725485_06704
Unannotated protein.
 
 
  0.823
GCA_000725485_05265
Unannotated protein.
 
 
  0.813
GCA_000725485_03831
Unannotated protein.
  
  0.784
GCA_000725485_07791
Unannotated protein.
    
  0.780
Your Current Organism:
Nonomuraea candida
NCBI taxonomy Id: 359159
Other names: DSM 45086, JCM 15928, N. candida, NRRL B-24552, Nonomuraea candida le Roes and Meyers 2009, strain HMC10
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.