STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB1_0350Polysaccharide deacetylase. (233 aa)    
Predicted Functional Partners:
BAB1_0351
Glycosyl transferase, family 25.
       0.773
BAB1_0326
Glycosyl transferase, family 2.
  
 
 0.650
BAB2_0693
Glycosyl transferase, group 2 family protein.
  
 
 0.650
BAB1_0352
Conserved hypothetical protein.
       0.498
BAB1_0349
Aminotransferase, class-II:Aminolevulinic acid synthase:Aminotransferase, class I and II.
       0.480
BAB1_0532
Transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
  
 
  0.414
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.