STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB1_0427SAM (and some other nucleotide) binding motif:Site-specific DNA-methyltransferase (cytosine-N4-specific):N-6 Adenine-specific. (252 aa)    
Predicted Functional Partners:
BAB1_0428
Conserved hypothetical protein.
       0.752
nhaA
Clp protease:Peptidase U7:Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; In the N-terminal section; belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
       0.608
BAB1_0426
Conserved hypothetical protein.
       0.608
BAB1_0429
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.487
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
    0.472
BAB1_0922
Conserved hypothetical protein.
  
     0.471
BAB1_0430
TPR repeat.
 
     0.454
ppdK
PEP-utilizing enzyme:Pyruvate phosphate dikinase, PEP/pyruvate-binding; Belongs to the PEP-utilizing enzyme family.
    
  0.447
rimP
Domain of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
 
     0.415
BAB1_0794
SmpA/OmlA.
  
     0.414
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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