rpsF protein (Brucella abortus) - STRING interaction network

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Score

rpsF

Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (148 aa)

Predicted Functional Partners:

rplI

0.999

rpsR

0.999

rpsI

0.999

rpsB

0.999

rpsK

0.999

rpsE

0.999

rpsN

0.999

rplE

0.999

rpsC

0.999

rpsJ

0.999

Your Current Organism:

Brucella abortus

NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplE	rplI	BAB1_1243	BAB1_0477	Ribosomal protein L5:Mitochondrial ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Ribosomal protein L9; Binds to the 23S rRNA.	0.998
rplE	rpsB	BAB1_1243	BAB1_1184	Ribosomal protein L5:Mitochondrial ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Ribosomal protein S2:Ribosomal protein S2, bacterial and organelle form; Belongs to the universal ribosomal protein uS2 family.	0.999
rplE	rpsC	BAB1_1243	BAB1_1249	Ribosomal protein L5:Mitochondrial ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Ribosomal protein S3:Type 2 KH domain:KH domain:Bacterial ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplE	rpsE	BAB1_1243	BAB1_1238	Ribosomal protein L5:Mitochondrial ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.999
rplE	rpsF	BAB1_1243	BAB1_0480	Ribosomal protein L5:Mitochondrial ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.999
rplE	rpsI	BAB1_1243	BAB1_0810	Ribosomal protein L5:Mitochondrial ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplE	rpsJ	BAB1_1243	BAB1_1256	Ribosomal protein L5:Mitochondrial ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Ribosomal protein S10:Ribosomal protein S10, bacterial form; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplE	rpsK	BAB1_1243	BAB1_1232	Ribosomal protein L5:Mitochondrial ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.999
rplE	rpsN	BAB1_1243	BAB1_1242	Ribosomal protein L5:Mitochondrial ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.999
rplE	rpsR	BAB1_1243	BAB1_0479	Ribosomal protein L5:Mitochondrial ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.998
rplI	rplE	BAB1_0477	BAB1_1243	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L5:Mitochondrial ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	0.998
rplI	rpsB	BAB1_0477	BAB1_1184	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S2:Ribosomal protein S2, bacterial and organelle form; Belongs to the universal ribosomal protein uS2 family.	0.998
rplI	rpsC	BAB1_0477	BAB1_1249	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S3:Type 2 KH domain:KH domain:Bacterial ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
rplI	rpsE	BAB1_0477	BAB1_1238	Ribosomal protein L9; Binds to the 23S rRNA.	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.997
rplI	rpsF	BAB1_0477	BAB1_0480	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.999
rplI	rpsI	BAB1_0477	BAB1_0810	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.998
rplI	rpsJ	BAB1_0477	BAB1_1256	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S10:Ribosomal protein S10, bacterial form; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.997
rplI	rpsK	BAB1_0477	BAB1_1232	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.998
rplI	rpsN	BAB1_0477	BAB1_1242	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.997
rplI	rpsR	BAB1_0477	BAB1_0479	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.999