STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB1_0809Putative agmatinase:Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family. (316 aa)    
Predicted Functional Partners:
BAB2_0518
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.826
gltB
Glutamate synthase amidotransferase domain:Glutamate synthase central domain.
     
 0.677
BAB2_0098
Orn/DAP/Arg decarboxylase, family 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.625
rpsI
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
    0.602
hutI
Imidazolonepropionase:Amidohydrolase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
  
 
 0.601
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
     
 0.599
BAB1_0364
ATP/GTP-binding site motif A (P-loop):Saccharopine dehydrogenase.
   
  0.563
rplM
Ribosomal protein L13:Ribosomal protein L13, bacterial and organelle form; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
    0.545
BAB2_0285
Aminotransferase class-III.
 
 
 0.535
hutH
Phenylalanine/histidine ammonia-lyase:Histidine ammonia-lyase; Belongs to the PAL/histidase family.
  
  
 0.530
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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